Genome
Data
System
Label | ![]() |
Attributes | ![]() |
![]() |
![]() |
Assembly | Options |
---|---|---|---|---|---|---|---|
KRE28 | mRNA |
[+]
| KRE28 | SGD:S000002940 | rna1598 | gene1647 | | KRE28 | | | | | | | | mRNA | | | | | | | | | |
|
1530308 | 1531465 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
KRE28 | gene |
[+]
| | SGD:S000002940 | gene1647 | | WN66_01627 | KRE28 | YDR532C~KRE28~Verified | WN66_01627 | protein_coding | | Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Spc105p; modified by sumoylation | | | Gene | | | | | | | | | |
|
1530308 | 1531465 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
exon |
[+]
| HSP31 | SGD:S000002941 | id1773 | rna1599 | | | | | | | | | | mRNA | | | | | | | | | |
|
1532361 | 1533074 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| HSP31 | NCBI_GP:KZV12778.1; SGD:S000002941 | cds1530 | rna1599 | KZV12778.1 | | | | | KZV12778.1 | | | | CDS | | | | | | | | | |
|
1532361 | 1533074 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
HSP31 | mRNA |
[+]
| HSP31 | SGD:S000002941 | rna1599 | gene1648 | | HSP31 | | | | | | | | mRNA | | | | | | | | | |
|
1532361 | 1533074 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
HSP31 | gene |
[+]
| | SGD:S000002941 | gene1648 | | WN66_01628 | HSP31 | YDR533C~HSP31~Verified | WN66_01628 | protein_coding | | Methylglyoxalase that converts methylglyoxal to D-lactate; involved in oxidative stress resistance, diauxic shift, and stationary phase survival; has similarity to E. coli Hsp31 and C. albicans Glx3p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer; exists as a dimer and contains a putative metal-binding site; protein abundance increases in response to DNA replication stress | | | Gene | | | | | | | | | |
|
1532361 | 1533074 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
gene |
[+]
| | | gene1649 | | WN66_01629 | | YDR534C~Verified | WN66_01629 | protein_coding | | | | | Gene | | | | | | | | | |
|
1534226 | 1535629 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
mRNA |
[+]
| FIT1 | | rna1600 | gene1649 | | | | | | | | | | mRNA | | | | | | | | | |
|
1534226 | 1535629 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| FIT1 | | id1774 | rna1600 | | | | | | | | | | mRNA | | | | | | | | | |
|
1534226 | 1535629 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| FIT1 | NCBI_GP:KZV12779.1 | cds1531 | rna1600 | KZV12779.1 | | | | | KZV12779.1 | | | | CDS | | | | | | | | | |
|
1534226 | 1535629 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
gene |
[+]
| | SGD:S000002943 | gene1650 | | WN66_01630 | | YDR535C~Dubious | WN66_01630 | pseudogene | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene | true | | Gene | | | | | | | | | |
|
1537275 | 1538033 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| STL1 | SGD:S000002944 | id1775 | rna1601 | | | | | | | | | | mRNA | | | | | | | | | |
|
1538681 | 1540390 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| STL1 | NCBI_GP:KZV12780.1; SGD:S000002944 | cds1532 | rna1601 | KZV12780.1 | | | | | KZV12780.1 | | | | CDS | | | | | | | | | |
|
1538681 | 1540390 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
STL1 | mRNA |
[+]
| STL1 | SGD:S000002944 | rna1601 | gene1651 | | STL1 | | | | | | | | mRNA | | | | | | | | | |
|
1538681 | 1540390 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
STL1 | gene |
[+]
| | SGD:S000002944 | gene1651 | | WN66_01631 | STL1 | YDR536W~STL1~Verified | WN66_01631 | protein_coding | | Glycerol proton symporter of the plasma membrane; subject to glucose-induced inactivation, strongly but transiently induced when cells are subjected to osmotic shock | | | Gene | | | | | | | | | |
|
1538681 | 1540390 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
mRNA |
[+]
| hypothetical protein | SGD:S000002945 | rna1602 | gene1652 | | | | | | | | | | mRNA | | | | | | | | | |
|
1541531 | 1542136 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| hypothetical protein | SGD:S000002945 | id1776 | rna1602 | | | | | | | | | | mRNA | | | | | | | | | |
|
1541531 | 1542136 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| hypothetical protein | NCBI_GP:KZV12781.1; SGD:S000002945 | cds1533 | rna1602 | KZV12781.1 | | | | | KZV12781.1 | | | | CDS | | | | | | | | | |
|
1541531 | 1542136 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
gene |
[+]
| | SGD:S000002945 | gene1652 | | WN66_01632 | | YDR537C~Dubious | WN66_01632 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W | | | Gene | | | | | | | | | |
|
1541531 | 1542136 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| PAD1 | SGD:S000002946 | id1777 | rna1603 | | | | | | | | | | mRNA | | | | | | | | | |
|
1541577 | 1542305 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| PAD1 | NCBI_GP:KZV12782.1; SGD:S000002946 | cds1534 | rna1603 | KZV12782.1 | | | | | KZV12782.1 | | | | CDS | | | | | | | | | |
|
1541577 | 1542305 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
PAD1 | mRNA |
[+]
| PAD1 | SGD:S000002946 | rna1603 | gene1653 | | PAD1 | | | | | | | | mRNA | | | | | | | | | |
|
1541577 | 1542305 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
PAD1 | gene |
[+]
| | SGD:S000002946 | gene1653 | | WN66_01633 | PAD1 | YDR538W~PAD1,POF1~Verified | WN66_01633 | protein_coding | | Phenylacrylic acid decarboxylase; confers resistance to cinnamic acid, decarboxylates aromatic carboxylic acids to the corresponding vinyl derivatives; also has mRNA binding activity; homolog of E. coli UbiX; co-overproduction of Pad1p and Fdc1p greatly increases cinnamic acid decarboxylase activity | | | Gene | | | | | | | | | |
|
1541577 | 1542305 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
FDC1 | gene |
[+]
| | SGD:S000002947 | gene1654 | | WN66_01634 | FDC1 | YDR539W~FDC1~Verified | WN66_01634 | pseudogene | | Ferulic acid decarboxylase, also active on p-coumaric acid; essential for decarboxylation of aromatic carboxylic acids to corresponding vinyl derivatives; co-overproduction of Pad1p and Fdc1p greatly increases cinnamic acid decarboxylase activity; structure implicates Glu285 as the general base in the nonoxidative decarboxylation reaction catalyzed by Fdc1p; homolog of E. coli UbiD; GFP-fusion protein localizes to cytoplasm | true | | Gene | | | | | | | | | |
|
1542769 | 1544279 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
IRC4 | gene |
[+]
| | SGD:S000002948 | gene1655 | | WN66_01635 | IRC4 | YDR540C~IRC4~Verified | WN66_01635 | pseudogene | | Protein of unknown function; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus | true | | Gene | | | | | | | | | |
|
1547816 | 1548353 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
mRNA |
[+]
| hypothetical protein | SGD:S000002949 | rna1604 | gene1656 | | | | | | | | | | mRNA | | | | | | | | | |
|
1550294 | 1551328 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| hypothetical protein | SGD:S000002949 | id1778 | rna1604 | | | | | | | | | | mRNA | | | | | | | | | |
|
1550294 | 1551328 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| hypothetical protein | NCBI_GP:KZV12783.1; SGD:S000002949 | cds1535 | rna1604 | KZV12783.1 | | | | | KZV12783.1 | | | | CDS | | | | | | | | | |
|
1550294 | 1551328 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
gene |
[+]
| | SGD:S000002949 | gene1656 | | WN66_01636 | | YDR541C~Verified | WN66_01636 | protein_coding | | Aldehyde reductase; substrates include both aromatic and aliphatic aldehydes; uses NADPH as cofactor; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively | | | Gene | | | | | | | | | |
|
1550294 | 1551328 | R | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
exon |
[+]
| PAU10 | SGD:S000002950 | id1779 | rna1605 | | | | | | | | | | mRNA | | | | | | | | | |
|
1553875 | 1554237 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
CDS |
[+]
| PAU10 | NCBI_GP:KZV12784.1; SGD:S000002950 | cds1536 | rna1605 | KZV12784.1 | | | | | KZV12784.1 | | | | CDS | | | | | | | | | |
|
1553875 | 1554237 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
PAU10 | mRNA |
[+]
| PAU10 | SGD:S000002950 | rna1605 | gene1657 | | PAU10 | | | | | | | | mRNA | | | | | | | | | |
|
1553875 | 1554237 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
PAU10 | gene |
[+]
| | SGD:S000002950 | gene1657 | | WN66_01637 | PAU10 | YDR542W~PAU10~Verified | WN66_01637 | protein_coding | | Protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole; member of the seripauperin multigene family encoded mainly in subtelomeric regions | | | Gene | | | | | | | | | |
|
1553875 | 1554237 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |
sequence_feature |
[+]
| | SGD:S000028949 | id1781 | | | | repeat_region~TEL04R-TR~annotation lifted over from S288C-R64 reference | | | | | | | misc_feature | | | | | | | | | |
|
1556006 | 1556339 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
sequence_feature |
[+]
| | SGD:S000028876 | id1780 | | | | repeat_region~TEL04L-TR~annotation lifted over from S288C-R64 reference | | | | | | | misc_feature | | | | | | | | | |
|
1555934 | 1556349 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence | |
region |
[+]
| | taxon:4932 | id850 | | IV | | | | | | | | | Src | genomic DNA | GLBRCY22-3 | Costa Rica | banana | chromosome | IV | | | |
|
1 | 1556355 | F | GLBRC Y22-3 ( GCA_001634645.1 ) | Details | Sequence |