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Label Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Type Attributes Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Start Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558End Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Strand Assembly Options
sequence_feature
[+]  | | SGD:S000118319 | id66 | | | | ARS~ARS107~ARSI-125~annotation lifted over from S288C-R64 reference | | | | | | | misc_feature | | | | | | | | | |
110951 111199 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | SGD:S000028728 | gene65 | | WN66_00066 | | YAL016C-A~Dubious | WN66_00066 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF TPD3/YAL016W | | | Gene | | | | | | | | | |
111357 111671 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | SGD:S000028728 | rna60 | gene65 | | | | | | | | | | mRNA | | | | | | | | | |
111357 111671 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | SGD:S000028728 | id67 | rna60 | | | | | | | | | | mRNA | | | | | | | | | |
111357 111671 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | NCBI_GP:KZV13453.1; SGD:S000028728 | cds59 | rna60 | KZV13453.1 | | | | | KZV13453.1 | | | | CDS | | | | | | | | | |
111357 111671 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TPD3 gene
[+]  | | SGD:S000000014 | gene66 | | WN66_00067 | TPD3 | YAL016W~TPD3,FUN32~Verified | WN66_00067 | protein_coding | | Regulatory subunit A of the heterotrimeric PP2A complex; the heterotrimeric protein phosphatase 2A (PP2A) complex also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III | | | Gene | | | | | | | | | |
111481 113388 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TPD3 mRNA
[+]  | TPD3 | SGD:S000000014 | rna61 | gene66 | | TPD3 | | | | | | | | mRNA | | | | | | | | | |
111481 113388 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | TPD3 | SGD:S000000014 | id68 | rna61 | | | | | | | | | | mRNA | | | | | | | | | |
111481 113388 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | TPD3 | NCBI_GP:KZV13454.1; SGD:S000000014 | cds60 | rna61 | KZV13454.1 | | | | | KZV13454.1 | | | | CDS | | | | | | | | | |
111481 113388 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NTG1 gene
[+]  | | SGD:S000000013 | gene67 | | WN66_00068 | NTG1 | YAL015C~NTG1,FUN33,SCR1,ogg2~Verified | WN66_00068 | protein_coding | | DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; involved in base excision repair; acts in both nucleus and mitochondrion; creates a double-strand break at mtDNA origins that stimulates replication in response to oxidative stress; required for maintaining mitochondrial genome integrity; NTG1 has a paralog, NTG2, that arose from the whole genome duplication | | | Gene | | | | | | | | | |
113507 114706 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NTG1 mRNA
[+]  | NTG1 | SGD:S000000013 | rna62 | gene67 | | NTG1 | | | | | | | | mRNA | | | | | | | | | |
113507 114706 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | NTG1 | SGD:S000000013 | id69 | rna62 | | | | | | | | | | mRNA | | | | | | | | | |
113507 114706 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | NTG1 | NCBI_GP:KZV13455.1; SGD:S000000013 | cds61 | rna62 | KZV13455.1 | | | | | KZV13455.1 | | | | CDS | | | | | | | | | |
113507 114706 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SYN8 gene
[+]  | | SGD:S000000012 | gene68 | | WN66_00069 | SYN8 | YAL014C~SYN8,SLT2,UIP2~Verified | WN66_00069 | protein_coding | | Endosomal SNARE related to mammalian syntaxin 8 | | | Gene | | | | | | | | | |
114857 115624 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SYN8 mRNA
[+]  | SYN8 | SGD:S000000012 | rna63 | gene68 | | SYN8 | | | | | | | | mRNA | | | | | | | | | |
114857 115624 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SYN8 | SGD:S000000012 | id70 | rna63 | | | | | | | | | | mRNA | | | | | | | | | |
114857 115624 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SYN8 | NCBI_GP:KZV13456.1; SGD:S000000012 | cds62 | rna63 | KZV13456.1 | | | | | KZV13456.1 | | | | CDS | | | | | | | | | |
114857 115624 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
DEP1 gene
[+]  | | SGD:S000000011 | gene69 | | WN66_00070 | DEP1 | YAL013W~DEP1,FUN54~Verified | WN66_00070 | protein_coding | | Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation | | | Gene | | | | | | | | | |
115875 117092 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
DEP1 mRNA
[+]  | DEP1 | SGD:S000000011 | rna64 | gene69 | | DEP1 | | | | | | | | mRNA | | | | | | | | | |
115875 117092 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | DEP1 | SGD:S000000011 | id71 | rna64 | | | | | | | | | | mRNA | | | | | | | | | |
115875 117092 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | DEP1 | NCBI_GP:KZV13457.1; SGD:S000000011 | cds63 | rna64 | KZV13457.1 | | | | | KZV13457.1 | | | | CDS | | | | | | | | | |
115875 117092 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CYS3 gene
[+]  | | SGD:S000000010 | gene70 | | WN66_00071 | CYS3 | YAL012W~CYS3,CYI1,FUN35,STR1~Verified | WN66_00071 | protein_coding | | Cystathionine gamma-lyase; catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine; protein abundance increases in response to DNA replication stress | | | Gene | | | | | | | | | |
117404 118588 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CYS3 mRNA
[+]  | CYS3 | SGD:S000000010 | rna65 | gene70 | | CYS3 | | | | | | | | mRNA | | | | | | | | | |
117404 118588 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | CYS3 | SGD:S000000010 | id72 | rna65 | | | | | | | | | | mRNA | | | | | | | | | |
117404 118588 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | CYS3 | NCBI_GP:KZV13458.1; SGD:S000000010 | cds64 | rna65 | KZV13458.1 | | | | | KZV13458.1 | | | | CDS | | | | | | | | | |
117404 118588 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWC3 gene
[+]  | | SGD:S000000009 | gene71 | | WN66_00072 | SWC3 | YAL011W~SWC3,SWC1~Verified | WN66_00072 | protein_coding | | Protein of unknown function; component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae | | | Gene | | | | | | | | | |
118804 120681 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWC3 mRNA
[+]  | SWC3 | SGD:S000000009 | rna66 | gene71 | | SWC3 | | | | | | | | mRNA | | | | | | | | | |
118804 120681 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SWC3 | SGD:S000000009 | id73 | rna66 | | | | | | | | | | mRNA | | | | | | | | | |
118804 120681 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SWC3 | NCBI_GP:KZV13459.1; SGD:S000000009 | cds65 | rna66 | KZV13459.1 | | | | | KZV13459.1 | | | | CDS | | | | | | | | | |
118804 120681 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
MDM10 gene
[+]  | | SGD:S000000008 | gene72 | | WN66_00073 | MDM10 | YAL010C~MDM10,FUN37~Verified | WN66_00073 | protein_coding | | Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase | | | Gene | | | | | | | | | |
120789 122270 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
MDM10 mRNA
[+]  | MDM10 | SGD:S000000008 | rna67 | gene72 | | MDM10 | | | | | | | | mRNA | | | | | | | | | |
120789 122270 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | MDM10 | SGD:S000000008 | id74 | rna67 | | | | | | | | | | mRNA | | | | | | | | | |
120789 122270 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | MDM10 | NCBI_GP:KZV13460.1; SGD:S000000008 | cds66 | rna67 | KZV13460.1 | | | | | KZV13460.1 | | | | CDS | | | | | | | | | |
120789 122270 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SPO7 gene
[+]  | | SGD:S000000007 | gene73 | | WN66_00074 | SPO7 | YAL009W~SPO7~Verified | WN66_00074 | protein_coding | | Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation | | | Gene | | | | | | | | | |
122459 123238 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SPO7 mRNA
[+]  | SPO7 | SGD:S000000007 | rna68 | gene73 | | SPO7 | | | | | | | | mRNA | | | | | | | | | |
122459 123238 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SPO7 | SGD:S000000007 | id75 | rna68 | | | | | | | | | | mRNA | | | | | | | | | |
122459 123238 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SPO7 | NCBI_GP:KZV13461.1; SGD:S000000007 | cds67 | rna68 | KZV13461.1 | | | | | KZV13461.1 | | | | CDS | | | | | | | | | |
122459 123238 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
FUN14 gene
[+]  | | SGD:S000000006 | gene74 | | WN66_00075 | FUN14 | YAL008W~FUN14~Verified | WN66_00075 | protein_coding | | Integral mitochondrial outer membrane (MOM) protein; dosage suppressor of an MDM10 null that reduces ERMES-related phenotypes, such as alterations in mitochondrial morphology, protein complex assembly, and lipid profile; dosage suppressor of MDM12, MDM34, and MMM1 null mutant growth defects; novel mechanism of MOM import involving Tom70p, the TOM complex, and the TIM23 complex, requiring mitochondrial membrane potential and processing by the IMP complex for correct biogenesis | | | Gene | | | | | | | | | |
123519 124115 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
FUN14 mRNA
[+]  | FUN14 | SGD:S000000006 | rna69 | gene74 | | FUN14 | | | | | | | | mRNA | | | | | | | | | |
123519 124115 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | FUN14 | SGD:S000000006 | id76 | rna69 | | | | | | | | | | mRNA | | | | | | | | | |
123519 124115 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | FUN14 | NCBI_GP:KZV13462.1; SGD:S000000006 | cds68 | rna69 | KZV13462.1 | | | | | KZV13462.1 | | | | CDS | | | | | | | | | |
123519 124115 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP2 gene
[+]  | | SGD:S000000005 | gene75 | | WN66_00076 | ERP2 | YAL007C~ERP2~Verified | WN66_00076 | protein_coding | | Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP2 has a paralog, ERP4, that arose from the whole genome duplication | | | Gene | | | | | | | | | |
124303 124950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP2 mRNA
[+]  | ERP2 | SGD:S000000005 | rna70 | gene75 | | ERP2 | | | | | | | | mRNA | | | | | | | | | |
124303 124950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | ERP2 | SGD:S000000005 | id77 | rna70 | | | | | | | | | | mRNA | | | | | | | | | |
124303 124950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | ERP2 | NCBI_GP:KZV13463.1; SGD:S000000005 | cds69 | rna70 | KZV13463.1 | | | | | KZV13463.1 | | | | CDS | | | | | | | | | |
124303 124950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
sequence_feature
[+]  | | SGD:S000006786 | id78 | | | | long_terminal_repeat~YALCdelta2~Ty1 LTR~annotation lifted over from S288C-R64 reference | | | | | | | misc_feature | | | | | | | | | |
125436 125597 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene76 | | WN66_00077 | | tP(UGG)A | WN66_00077 | tRNA | | | | | Gene | | | | | | | | | |
125757 125859 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
tRNA
[+]  | tRNA-Pro | | rna71 | gene76 | | | | | | | | | | tRNA | | | | | | | | | |
125757 125859 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | tRNA-Pro | | id79 | rna71 | | | | | | | | | | tRNA | | | | | | | | | |
125757 125792 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | tRNA-Pro | | id80 | rna71 | | | | | | | | | | tRNA | | | | | | | | | |
125824 125859 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence