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Label Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Type Attributes Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Start Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558End Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Strand Assembly Options
SSA1 gene
[+]  | | SGD:S000000004 | gene77 | | WN66_00078 | SSA1 | YAL005C~SSA1,YG100~Verified | WN66_00078 | protein_coding | | ATPase involved in protein folding and NLS-directed nuclear transport; member of HSP70 family; required for ubiquitin-dependent degradation of short-lived proteins; forms chaperone complex with Ydj1p; localized to nucleus, cytoplasm, cell wall; 98% identical to paralog Ssa2p with different functional specificity in propagation of yeast [URE3] prions, vacuolar-mediated degradations of gluconeogenesis enzymes; general targeting factor of Hsp104p to prion fibrils | | | Gene | | | | | | | | | |
126108 128036 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SSA1 mRNA
[+]  | SSA1 | SGD:S000000004 | rna72 | gene77 | | SSA1 | | | | | | | | mRNA | | | | | | | | | |
126108 128036 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SSA1 | SGD:S000000004 | id81 | rna72 | | | | | | | | | | mRNA | | | | | | | | | |
126108 128036 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SSA1 | NCBI_GP:KZV13464.1; SGD:S000000004 | cds70 | rna72 | KZV13464.1 | | | | | KZV13464.1 | | | | CDS | | | | | | | | | |
126108 128036 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | SGD:S000002136 | gene78 | | WN66_00079 | | YAL004W~Dubious | WN66_00079 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C | | | Gene | | | | | | | | | |
127365 128012 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | SGD:S000002136 | rna73 | gene78 | | | | | | | | | | mRNA | | | | | | | | | |
127365 128012 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | SGD:S000002136 | id82 | rna73 | | | | | | | | | | mRNA | | | | | | | | | |
127365 128012 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | NCBI_GP:KZV13465.1; SGD:S000002136 | cds71 | rna73 | KZV13465.1 | | | | | KZV13465.1 | | | | CDS | | | | | | | | | |
127365 128012 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene79 | | WN66_00080 | | YAL003W~Verified | WN66_00080 | protein_coding | | | | | Gene | | | | | | | | | |
128779 129768 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | EFB1 | | rna74 | gene79 | | | | | | | | | | mRNA | | | | | | | | | |
128779 129768 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | EFB1 | | id83 | rna74 | | | | | | | | | | mRNA | | | | | | | | | |
128779 128858 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | EFB1 | | id84 | rna74 | | | | | | | | | | mRNA | | | | | | | | | |
129225 129768 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | EFB1 | NCBI_GP:KZV13466.1 | cds72 | rna74 | KZV13466.1 | | | | | KZV13466.1 | | | | CDS | | | | | | | | | |
128779 129768 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene80 | | WN66_00081 | | | WN66_00081 | snoRNA | | | | | Gene | | | | | | | | | |
128972 129073 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ncRNA
[+]  | snR18 | SGD:S000007500 | rna75 | gene80 | | | annotation lifted over from S288C-R64 reference | | | | | | snoRNA | ncRNA | | | | | | | | | |
128972 129073 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | snR18 | SGD:S000007500 | id85 | rna75 | | | annotation lifted over from S288C-R64 reference | | | | | | snoRNA | ncRNA | | | | | | | | | |
128972 129073 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
VPS8 gene
[+]  | | SGD:S000000002 | gene81 | | WN66_00082 | VPS8 | YAL002W~VPS8,FUN15,VPL8,VPT8~Verified | WN66_00082 | protein_coding | | Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif | | | Gene | | | | | | | | | |
130315 134139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
VPS8 mRNA
[+]  | VPS8 | SGD:S000000002 | rna76 | gene81 | | VPS8 | | | | | | | | mRNA | | | | | | | | | |
130315 134139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | VPS8 | SGD:S000000002 | id86 | rna76 | | | | | | | | | | mRNA | | | | | | | | | |
130315 134139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | VPS8 | NCBI_GP:KZV13467.1; SGD:S000000002 | cds73 | rna76 | KZV13467.1 | | | | | KZV13467.1 | | | | CDS | | | | | | | | | |
130315 134139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
sequence_feature
[+]  | | SGD:S000121255 | id87 | | | | ARS~ARS108~ARSI-147~annotation lifted over from S288C-R64 reference | | | | | | | misc_feature | | | | | | | | | |
133309 134296 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TFC3 gene
[+]  | | SGD:S000000001 | gene82 | | WN66_00083 | TFC3 | YAL001C~TFC3,FUN24,TSV115~Verified | WN66_00083 | protein_coding | | Subunit of RNA polymerase III transcription initiation factor complex; part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) | | | Gene | | | | | | | | | |
134202 137774 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TFC3 mRNA
[+]  | TFC3 | SGD:S000000001 | rna77 | gene82 | | TFC3 | | | | | | | | mRNA | | | | | | | | | |
134202 137774 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | TFC3 | SGD:S000000001 | id88 | rna77 | | | | | | | | | | mRNA | | | | | | | | | |
137705 137774 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | TFC3 | SGD:S000000001 | id89 | rna77 | | | | | | | | | | mRNA | | | | | | | | | |
134202 137614 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | TFC3 | NCBI_GP:KZV13468.1; SGD:S000000001 | cds74 | rna77 | KZV13468.1 | | | | | KZV13468.1 | | | | CDS | | | | | | | | | |
134202 137774 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
centromere
[+]  | | | id90 | | | | | | | | | | | centromere | | | | | | | | | |
138073 138190 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NUP60 gene
[+]  | | SGD:S000000063 | gene83 | | WN66_00084 | NUP60 | YAR002W~NUP60~Verified | WN66_00084 | protein_coding | | FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier and is involved in gene tethering at the nuclear periphery; relocalizes to the cytosol in response to hypoxia; both NUP1 and NUP60 are homologous to human NUP153 | | | Gene | | | | | | | | | |
138865 140484 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NUP60 mRNA
[+]  | NUP60 | SGD:S000000063 | rna78 | gene83 | | NUP60 | | | | | | | | mRNA | | | | | | | | | |
138865 140484 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | NUP60 | SGD:S000000063 | id91 | rna78 | | | | | | | | | | mRNA | | | | | | | | | |
138865 140484 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | NUP60 | NCBI_GP:KZV13469.1; SGD:S000000063 | cds75 | rna78 | KZV13469.1 | | | | | KZV13469.1 | | | | CDS | | | | | | | | | |
138865 140484 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP1 gene
[+]  | | SGD:S000002129 | gene84 | | WN66_00085 | ERP1 | YAR002C-A~ERP1~Verified | WN66_00085 | protein_coding | | Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms heterotrimeric complex with Erp2p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP1 has a paralog, ERP6, that arose from the whole genome duplication | | | Gene | | | | | | | | | |
140673 141332 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP1 mRNA
[+]  | ERP1 | SGD:S000002129 | rna79 | gene84 | | ERP1 | | | | | | | | mRNA | | | | | | | | | |
140673 141332 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | ERP1 | SGD:S000002129 | id92 | rna79 | | | | | | | | | | mRNA | | | | | | | | | |
140673 141332 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | ERP1 | NCBI_GP:KZV13470.1; SGD:S000002129 | cds76 | rna79 | KZV13470.1 | | | | | KZV13470.1 | | | | CDS | | | | | | | | | |
140673 141332 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWD1 gene
[+]  | | SGD:S000000064 | gene85 | | WN66_00086 | SWD1 | YAR003W~SWD1,CPS50,FUN16,SAF49~Verified | WN66_00086 | protein_coding | | Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7 | | | Gene | | | | | | | | | |
141613 142893 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWD1 mRNA
[+]  | SWD1 | SGD:S000000064 | rna80 | gene85 | | SWD1 | | | | | | | | mRNA | | | | | | | | | |
141613 142893 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SWD1 | SGD:S000000064 | id93 | rna80 | | | | | | | | | | mRNA | | | | | | | | | |
141613 142893 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SWD1 | NCBI_GP:KZV13471.1; SGD:S000000064 | cds77 | rna80 | KZV13471.1 | | | | | KZV13471.1 | | | | CDS | | | | | | | | | |
141613 142893 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
RFA1 gene
[+]  | | SGD:S000000065 | gene86 | | WN66_00087 | RFA1 | YAR007C~RFA1,BUF2,FUN3,RPA1~Verified | WN66_00087 | protein_coding | | Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia | | | Gene | | | | | | | | | |
143362 145227 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
RFA1 mRNA
[+]  | RFA1 | SGD:S000000065 | rna81 | gene86 | | RFA1 | | | | | | | | mRNA | | | | | | | | | |
143362 145227 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | RFA1 | SGD:S000000065 | id94 | rna81 | | | | | | | | | | mRNA | | | | | | | | | |
143362 145227 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | RFA1 | NCBI_GP:KZV13472.1; SGD:S000000065 | cds78 | rna81 | KZV13472.1 | | | | | KZV13472.1 | | | | CDS | | | | | | | | | |
143362 145227 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SEN34 gene
[+]  | | SGD:S000000066 | gene87 | | WN66_00088 | SEN34 | YAR008W~SEN34,FUN4~Verified | WN66_00088 | protein_coding | | Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease | | | Gene | | | | | | | | | |
145574 146401 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SEN34 mRNA
[+]  | SEN34 | SGD:S000000066 | rna82 | gene87 | | SEN34 | | | | | | | | mRNA | | | | | | | | | |
145574 146401 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SEN34 | SGD:S000000066 | id95 | rna82 | | | | | | | | | | mRNA | | | | | | | | | |
145574 146401 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SEN34 | NCBI_GP:KZV13473.1; SGD:S000000066 | cds79 | rna82 | KZV13473.1 | | | | | KZV13473.1 | | | | CDS | | | | | | | | | |
145574 146401 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene88 | | WN66_00089 | | tA(UGC)A | WN66_00089 | tRNA | | | | | Gene | | | | | | | | | |
146943 147015 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
tRNA
[+]  | tRNA-Ala | | rna83 | gene88 | | | | | | | | | | tRNA | | | | | | | | | |
146943 147015 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | tRNA-Ala | | id96 | rna83 | | | | | | | | | | tRNA | | | | | | | | | |
146943 147015 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence