Sign In

Feature Listing

Upload Features
Create Feature
Search:
Assembly:

Label Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Type Attributes Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Start Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558End Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Strand Assembly Options
FRT2 gene
[+]  | gene50 | WN66_00051 | protein_coding | Gene | YAL028W~FRT2,HPH2~Verified | SGD:S000000026 | Tail-anchored ER membrane protein of unknown function; interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate; FRT2 has a paralog, FRT1, that arose from the whole genome duplication | FRT2 | | WN66_00051
79514 81100 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SAW1 gene
[+]  | gene51 | WN66_00052 | protein_coding | Gene | YAL027W~SAW1~Verified | SGD:S000000025 | 5'- and 3'-flap DNA binding protein; recruits Rad1p-Rad10p to single-strand annealing intermediates with 3' non-homologous tails for removal during double-strand break repair; complexes with Rad1p-Rad10p and stimulates its endonuclease activity; green fluorescent protein (GFP)-fusion protein localizes to the nucleus | SAW1 | | WN66_00052
81301 82086 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
DRS2 gene
[+]  | gene52 | WN66_00053 | protein_coding | Gene | YAL026C~DRS2,FUN38,SWA3~Verified | SGD:S000000024 | Trans-golgi network aminophospholipid translocase (flippase); maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation, endocytosis, protein trafficking between the Golgi and endosomal system and the cellular response to mating pheromone; autoinhibited by its C-terminal tail; localizes to the trans-Golgi network; mutations in human homolog ATP8B1 result in liver disease | DRS2 | | WN66_00053
82244 86311 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene53 | WN66_00054 | ncRNA | Gene | | | | | | WN66_00054
85919 86482 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
MAK16 gene
[+]  | gene54 | WN66_00055 | protein_coding | Gene | YAL025C~MAK16~Verified | SGD:S000000023 | Essential nuclear protein; constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus | MAK16 | | WN66_00055
86838 87758 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
LTE1 gene
[+]  | gene55 | WN66_00056 | protein_coding | Gene | YAL024C~LTE1,MSI2~Verified | SGD:S000000022 | Protein similar to GDP/GTP exchange factors; without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures | LTE1 | | WN66_00056
88178 92485 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
PMT2 gene
[+]  | gene56 | WN66_00057 | protein_coding | Gene | YAL023C~PMT2,FUN25~Verified | SGD:S000000021 | Protein O-mannosyltransferase of the ER membrane; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; involved in ER quality control; acts in a complex with Pmt1p, can instead interact with Pmt5p; antifungal drug target; PMT2 has a paralog, PMT3, that arose from the whole genome duplication | PMT2 | | WN66_00057
92886 95165 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
FUN26 gene
[+]  | gene57 | WN66_00058 | protein_coding | Gene | YAL022C~FUN26~Verified | SGD:S000000020 | High affinity, broad selectivity, nucleoside/nucleobase transporter; vacuolar membrane localized transporter which may regulate the balance of nicotinamide riboside (NmR) levels between the cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis; equilibrative nucleoside transporter (ENT) family member | FUN26 | | WN66_00058
95490 97043 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CCR4 gene
[+]  | gene58 | WN66_00059 | protein_coding | Gene | YAL021C~CCR4,FUN27,NUT21~Verified | SGD:S000000019 | Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening | CCR4 | | WN66_00059
97454 99961 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ATS1 gene
[+]  | gene59 | WN66_00060 | protein_coding | Gene | YAL020C~ATS1,FUN28,KTI13~Verified | SGD:S000000018 | Protein required for modification of wobble nucleosides in tRNA; acts with Elongator complex, Kti11p, and Kti12p; has a potential role in regulatory interactions between microtubules and the cell cycle; forms a stable heterodimer with Kti11p | ATS1 | | WN66_00060
100216 101217 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene60 | WN66_00061 | protein_coding | Gene | YAL019W-A~Dubious | SGD:S000028729 | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C | | | WN66_00061
100852 101421 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
FUN30 gene
[+]  | gene61 | WN66_00062 | protein_coding | Gene | YAL019W~FUN30~Verified | SGD:S000000017 | Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs; potential Cdc28p substrate | FUN30 | | WN66_00062
101521 104916 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
LDS1 gene
[+]  | gene62 | WN66_00063 | protein_coding | Gene | YAL018C~Verified | SGD:S000000016 | Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants | LDS1 | | WN66_00063
105166 106143 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
PSK1 gene
[+]  | gene63 | WN66_00064 | protein_coding | Gene | YAL017W~PSK1,FUN31~Verified | SGD:S000000015 | PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication | PSK1 | | WN66_00064
106827 110897 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene64 | WN66_00065 | protein_coding | Gene | YAL016C-B~Dubious | SGD:S000028528 | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data | | | WN66_00065
110909 111094 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene65 | WN66_00066 | protein_coding | Gene | YAL016C-A~Dubious | SGD:S000028728 | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF TPD3/YAL016W | | | WN66_00066
111357 111671 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TPD3 gene
[+]  | gene66 | WN66_00067 | protein_coding | Gene | YAL016W~TPD3,FUN32~Verified | SGD:S000000014 | Regulatory subunit A of the heterotrimeric PP2A complex; the heterotrimeric protein phosphatase 2A (PP2A) complex also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III | TPD3 | | WN66_00067
111481 113388 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NTG1 gene
[+]  | gene67 | WN66_00068 | protein_coding | Gene | YAL015C~NTG1,FUN33,SCR1,ogg2~Verified | SGD:S000000013 | DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; involved in base excision repair; acts in both nucleus and mitochondrion; creates a double-strand break at mtDNA origins that stimulates replication in response to oxidative stress; required for maintaining mitochondrial genome integrity; NTG1 has a paralog, NTG2, that arose from the whole genome duplication | NTG1 | | WN66_00068
113507 114706 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SYN8 gene
[+]  | gene68 | WN66_00069 | protein_coding | Gene | YAL014C~SYN8,SLT2,UIP2~Verified | SGD:S000000012 | Endosomal SNARE related to mammalian syntaxin 8 | SYN8 | | WN66_00069
114857 115624 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
DEP1 gene
[+]  | gene69 | WN66_00070 | protein_coding | Gene | YAL013W~DEP1,FUN54~Verified | SGD:S000000011 | Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation | DEP1 | | WN66_00070
115875 117092 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CYS3 gene
[+]  | gene70 | WN66_00071 | protein_coding | Gene | YAL012W~CYS3,CYI1,FUN35,STR1~Verified | SGD:S000000010 | Cystathionine gamma-lyase; catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine; protein abundance increases in response to DNA replication stress | CYS3 | | WN66_00071
117404 118588 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWC3 gene
[+]  | gene71 | WN66_00072 | protein_coding | Gene | YAL011W~SWC3,SWC1~Verified | SGD:S000000009 | Protein of unknown function; component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae | SWC3 | | WN66_00072
118804 120681 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
MDM10 gene
[+]  | gene72 | WN66_00073 | protein_coding | Gene | YAL010C~MDM10,FUN37~Verified | SGD:S000000008 | Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase | MDM10 | | WN66_00073
120789 122270 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SPO7 gene
[+]  | gene73 | WN66_00074 | protein_coding | Gene | YAL009W~SPO7~Verified | SGD:S000000007 | Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation | SPO7 | | WN66_00074
122459 123238 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
FUN14 gene
[+]  | gene74 | WN66_00075 | protein_coding | Gene | YAL008W~FUN14~Verified | SGD:S000000006 | Integral mitochondrial outer membrane (MOM) protein; dosage suppressor of an MDM10 null that reduces ERMES-related phenotypes, such as alterations in mitochondrial morphology, protein complex assembly, and lipid profile; dosage suppressor of MDM12, MDM34, and MMM1 null mutant growth defects; novel mechanism of MOM import involving Tom70p, the TOM complex, and the TIM23 complex, requiring mitochondrial membrane potential and processing by the IMP complex for correct biogenesis | FUN14 | | WN66_00075
123519 124115 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP2 gene
[+]  | gene75 | WN66_00076 | protein_coding | Gene | YAL007C~ERP2~Verified | SGD:S000000005 | Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP2 has a paralog, ERP4, that arose from the whole genome duplication | ERP2 | | WN66_00076
124303 124950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene76 | WN66_00077 | tRNA | Gene | tP(UGG)A | | | | | WN66_00077
125757 125859 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SSA1 gene
[+]  | gene77 | WN66_00078 | protein_coding | Gene | YAL005C~SSA1,YG100~Verified | SGD:S000000004 | ATPase involved in protein folding and NLS-directed nuclear transport; member of HSP70 family; required for ubiquitin-dependent degradation of short-lived proteins; forms chaperone complex with Ydj1p; localized to nucleus, cytoplasm, cell wall; 98% identical to paralog Ssa2p with different functional specificity in propagation of yeast [URE3] prions, vacuolar-mediated degradations of gluconeogenesis enzymes; general targeting factor of Hsp104p to prion fibrils | SSA1 | | WN66_00078
126108 128036 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene78 | WN66_00079 | protein_coding | Gene | YAL004W~Dubious | SGD:S000002136 | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C | | | WN66_00079
127365 128012 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene79 | WN66_00080 | protein_coding | Gene | YAL003W~Verified | | | | | WN66_00080
128779 129768 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene80 | WN66_00081 | snoRNA | Gene | | | | | | WN66_00081
128972 129073 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
VPS8 gene
[+]  | gene81 | WN66_00082 | protein_coding | Gene | YAL002W~VPS8,FUN15,VPL8,VPT8~Verified | SGD:S000000002 | Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif | VPS8 | | WN66_00082
130315 134139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
TFC3 gene
[+]  | gene82 | WN66_00083 | protein_coding | Gene | YAL001C~TFC3,FUN24,TSV115~Verified | SGD:S000000001 | Subunit of RNA polymerase III transcription initiation factor complex; part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) | TFC3 | | WN66_00083
134202 137774 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
NUP60 gene
[+]  | gene83 | WN66_00084 | protein_coding | Gene | YAR002W~NUP60~Verified | SGD:S000000063 | FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier and is involved in gene tethering at the nuclear periphery; relocalizes to the cytosol in response to hypoxia; both NUP1 and NUP60 are homologous to human NUP153 | NUP60 | | WN66_00084
138865 140484 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ERP1 gene
[+]  | gene84 | WN66_00085 | protein_coding | Gene | YAR002C-A~ERP1~Verified | SGD:S000002129 | Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms heterotrimeric complex with Erp2p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP1 has a paralog, ERP6, that arose from the whole genome duplication | ERP1 | | WN66_00085
140673 141332 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SWD1 gene
[+]  | gene85 | WN66_00086 | protein_coding | Gene | YAR003W~SWD1,CPS50,FUN16,SAF49~Verified | SGD:S000000064 | Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7 | SWD1 | | WN66_00086
141613 142893 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
RFA1 gene
[+]  | gene86 | WN66_00087 | protein_coding | Gene | YAR007C~RFA1,BUF2,FUN3,RPA1~Verified | SGD:S000000065 | Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia | RFA1 | | WN66_00087
143362 145227 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SEN34 gene
[+]  | gene87 | WN66_00088 | protein_coding | Gene | YAR008W~SEN34,FUN4~Verified | SGD:S000000066 | Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease | SEN34 | | WN66_00088
145574 146401 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene88 | WN66_00089 | tRNA | Gene | tA(UGC)A | | | | | WN66_00089
146943 147015 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
BUD14 gene
[+]  | gene89 | WN66_00090 | protein_coding | Gene | YAR014C~BUD14~Verified | SGD:S000000069 | Protein involved in bud-site selection; Bud14p-Glc7p complex is a cortical regulator of dynein; forms a complex with Kel1p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; relative distribution to the nucleus increases upon DNA replication stress | BUD14 | | WN66_00090
147418 149547 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ADE1 gene
[+]  | gene90 | WN66_00091 | protein_coding | Gene | YAR015W~ADE1~Verified | SGD:S000000070 | N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine; protein abundance increases in response to DNA replication stress | ADE1 | | WN66_00091
150051 150971 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
KIN3 gene
[+]  | gene91 | WN66_00092 | protein_coding | Gene | YAR018C~KIN3,FUN52,NPK1~Verified | SGD:S000000071 | Nonessential serine/threonine protein kinase; possible role in DNA damage response; influences tolerance to high levels of ethanol | KIN3 | | WN66_00092
151072 152379 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDC15 gene
[+]  | gene92 | WN66_00093 | protein_coding | Gene | YAR019C~CDC15,LYT1~Verified | SGD:S000000072 | Protein kinase of the Mitotic Exit Network; localized to the spindle pole bodies at late anaphase; promotes mitotic exit by directly switching on the kinase activity of Dbf2p; required for spindle disassembly after meiosis II; relocalizes to the cytoplasm upon DNA replication stress | CDC15 | | WN66_00093
152886 155810 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene93 | WN66_00094 | protein_coding | Gene | YAR019W-A~Dubious | SGD:S000028735 | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF CDC15/YAR019C | | | WN66_00094
155673 156005 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
PAU7 gene
[+]  | gene94 | WN66_00095 | protein_coding | Gene | YAR020C~PAU7~Verified | SGD:S000000073 | Member of the seripauperin multigene family; active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme | PAU7 | | WN66_00095
157328 157696 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene95 | WN66_00096 | protein_coding | Gene | YAR023C~Uncharacterized | SGD:S000000074 | Putative integral membrane protein; member of DUP240 gene family | | | WN66_00096
159951 160490 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene96 | WN66_00097 | tRNA | Gene | tL(CAA)A | | | | | WN66_00097
162490 162603 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene97 | WN66_00098 | tRNA | Gene | tS(AGA)A | | | | | WN66_00098
163869 163950 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene98 | WN66_00099 | pseudogene | Gene | YAR028W~Uncharacterized | SGD:S000000076 | Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS | | true | WN66_00099
165078 165747 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | gene99 | WN66_00100 | protein_coding | Gene | hYAR028W~Uncharacterized | | | | | WN66_00100
166119 166271 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence