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Label Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Type Attributes Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Start Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558End Pos Sort off f637db7715914123844374c755c2460a7dfbccf7ada7dd2f49b33af0389a6558Strand Assembly Options
region
[+]  | | | id0 | | I | | | | | | | taxon:4932 | | Src | genomic DNA | GLBRCY22-3 | Costa Rica | banana | chromosome | I | | | |
1 214974 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene0 | | WN66_00001 | | YAL069W~Dubious | WN66_00001 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data | SGD:S000002143 | | Gene | | | | | | | | | |
828 1139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | | rna0 | gene0 | | | | | | | | SGD:S000002143 | | mRNA | | | | | | | | | |
828 1139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | | id1 | rna0 | | | | | | | | SGD:S000002143 | | mRNA | | | | | | | | | |
828 1139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | | cds0 | rna0 | KZV13394.1 | | | | | KZV13394.1 | | NCBI_GP:KZV13394.1; SGD:S000002143 | | CDS | | | | | | | | | |
828 1139 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
sequence_feature
[+]  | | | id2 | | | | repeat_region~TEL01L-XC~annotation lifted over from S288C-R64 reference | | | | | SGD:S000028865 | | misc_feature | | | | | | | | | |
830 1291 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene1 | | WN66_00002 | | YAL068W-A~Dubious | WN66_00002 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching | SGD:S000028594 | | Gene | | | | | | | | | |
1028 1282 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | | rna1 | gene1 | | | | | | | | SGD:S000028594 | | mRNA | | | | | | | | | |
1028 1282 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | | id3 | rna1 | | | | | | | | SGD:S000028594 | | mRNA | | | | | | | | | |
1028 1282 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | | cds1 | rna1 | KZV13395.1 | | | | | KZV13395.1 | | NCBI_GP:KZV13395.1; SGD:S000028594 | | CDS | | | | | | | | | |
1028 1282 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
PAU8 gene
[+]  | | | gene2 | | WN66_00003 | PAU8 | YAL068C~PAU8~Verified | WN66_00003 | protein_coding | | Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions | SGD:S000002142 | | Gene | | | | | | | | | |
2304 2666 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
PAU8 mRNA
[+]  | PAU8 | | rna2 | gene2 | | PAU8 | | | | | | SGD:S000002142 | | mRNA | | | | | | | | | |
2304 2666 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | PAU8 | | id4 | rna2 | | | | | | | | SGD:S000002142 | | mRNA | | | | | | | | | |
2304 2666 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | PAU8 | | cds2 | rna2 | KZV13396.1 | | | | | KZV13396.1 | | NCBI_GP:KZV13396.1; SGD:S000002142 | | CDS | | | | | | | | | |
2304 2666 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | true | gene3 | | WN66_00004 | | YAL067W-A~Uncharacterized | WN66_00004 | pseudogene | | Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching | SGD:S000028593 | | Gene | | | | | | | | | |
2979 3206 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | true | gene4 | | WN66_00005 | | hYIR044C | WN66_00005 | pseudogene | | | | | Gene | | | | | | | | | |
4296 4466 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SEO1 gene
[+]  | | | gene5 | | WN66_00006 | SEO1 | YAL067C~SEO1~Verified | WN66_00006 | protein_coding | | Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide | SGD:S000000062 | | Gene | | | | | | | | | |
7749 9530 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
SEO1 mRNA
[+]  | SEO1 | | rna3 | gene5 | | SEO1 | | | | | | SGD:S000000062 | | mRNA | | | | | | | | | |
7749 9530 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | SEO1 | | id5 | rna3 | | | | | | | | SGD:S000000062 | | mRNA | | | | | | | | | |
7749 9530 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | SEO1 | | cds3 | rna3 | KZV13397.1 | | | | | KZV13397.1 | | NCBI_GP:KZV13397.1; SGD:S000000062 | | CDS | | | | | | | | | |
7749 9530 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
sequence_feature
[+]  | | | id6 | | | | ARS~ARS103~ARSI-8~annotation lifted over from S288C-R64 reference | | | | | SGD:S000121253 | | misc_feature | | | | | | | | | |
8511 9061 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene6 | | WN66_00007 | | YAL066W~Dubious | WN66_00007 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data | SGD:S000000061 | | Gene | | | | | | | | | |
10610 10918 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | | rna4 | gene6 | | | | | | | | SGD:S000000061 | | mRNA | | | | | | | | | |
10610 10918 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | | id7 | rna4 | | | | | | | | SGD:S000000061 | | mRNA | | | | | | | | | |
10610 10918 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | | cds4 | rna4 | KZV13398.1 | | | | | KZV13398.1 | | NCBI_GP:KZV13398.1; SGD:S000000061 | | CDS | | | | | | | | | |
10610 10918 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  FLO59 | | | gene7 | | FLO59 | | YAL063C | WN66_00008 | protein_coding | | | | | Gene | | | | | | | | | |
12084 14609 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  FLO59 | lectin-like cell wall protein (flocculin) involved in flocculation | | rna5 | gene7 | | | | | | | | | | mRNA | | | | | | | | | |
12084 14609 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  FLO59 | lectin-like cell wall protein (flocculin) involved in flocculation | | id8 | rna5 | | | | | | | | | | mRNA | | | | | | | | | |
12084 14609 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  FLO59 | lectin-like cell wall protein (flocculin) involved in flocculation | | cds5 | rna5 | KZV13399.1 | | | | | KZV13399.1 | | NCBI_GP:KZV13399.1 | | CDS | | | | | | | | | |
12084 14609 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene8 | | WN66_00009 | | YAL064W-B~Uncharacterized | WN66_00009 | protein_coding | | Fungal-specific protein of unknown function | SGD:S000002141 | | Gene | | | | | | | | | |
12538 12939 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | | rna6 | gene8 | | | | | | | | SGD:S000002141 | | mRNA | | | | | | | | | |
12538 12939 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | | id9 | rna6 | | | | | | | | SGD:S000002141 | | mRNA | | | | | | | | | |
12538 12939 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | | cds6 | rna6 | KZV13400.1 | | | | | KZV13400.1 | | NCBI_GP:KZV13400.1; SGD:S000002141 | | CDS | | | | | | | | | |
12538 12939 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
GDH3 gene
[+]  | | | gene9 | | WN66_00010 | GDH3 | YAL062W~GDH3,FUN51~Verified | WN66_00010 | protein_coding | | NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; GDH3 has a paralog, GDH1, that arose from the whole genome duplication | SGD:S000000058 | | Gene | | | | | | | | | |
18203 19576 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
GDH3 mRNA
[+]  | GDH3 | | rna7 | gene9 | | GDH3 | | | | | | SGD:S000000058 | | mRNA | | | | | | | | | |
18203 19576 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | GDH3 | | id10 | rna7 | | | | | | | | SGD:S000000058 | | mRNA | | | | | | | | | |
18203 19576 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | GDH3 | | cds7 | rna7 | KZV13401.1 | | | | | KZV13401.1 | | NCBI_GP:KZV13401.1; SGD:S000000058 | | CDS | | | | | | | | | |
18203 19576 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
BDH2 gene
[+]  | | | gene10 | | WN66_00011 | BDH2 | YAL061W~BDH2~Uncharacterized | WN66_00011 | protein_coding | | Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by constitutively active PDR1 and PDR3 | SGD:S000000057 | | Gene | | | | | | | | | |
20085 21338 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
BDH2 mRNA
[+]  | BDH2 | | rna8 | gene10 | | BDH2 | | | | | | SGD:S000000057 | | mRNA | | | | | | | | | |
20085 21338 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | BDH2 | | id11 | rna8 | | | | | | | | SGD:S000000057 | | mRNA | | | | | | | | | |
20085 21338 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | BDH2 | | cds8 | rna8 | KZV13402.1 | | | | | KZV13402.1 | | NCBI_GP:KZV13402.1; SGD:S000000057 | | CDS | | | | | | | | | |
20085 21338 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
BDH1 gene
[+]  | | | gene11 | | WN66_00012 | BDH1 | YAL060W~BDH1,BDH~Verified | WN66_00012 | protein_coding | | NAD-dependent (R,R)-butanediol dehydrogenase; catalyzes oxidation of (R,R)-2,3-butanediol to (3R)-acetoin, oxidation of meso-butanediol to (3S)-acetoin, and reduction of acetoin; enhances use of 2,3-butanediol as an aerobic carbon source | SGD:S000000056 | | Gene | | | | | | | | | |
21794 22942 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
BDH1 mRNA
[+]  | BDH1 | | rna9 | gene11 | | BDH1 | | | | | | SGD:S000000056 | | mRNA | | | | | | | | | |
21794 22942 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | BDH1 | | id12 | rna9 | | | | | | | | SGD:S000000056 | | mRNA | | | | | | | | | |
21794 22942 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | BDH1 | | cds9 | rna9 | KZV13403.1 | | | | | KZV13403.1 | | NCBI_GP:KZV13403.1; SGD:S000000056 | | CDS | | | | | | | | | |
21794 22942 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
gene
[+]  | | | gene12 | | WN66_00013 | | YAL059C-A~Dubious | WN66_00013 | protein_coding | | Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W | SGD:S000028734 | | Gene | | | | | | | | | |
23134 23556 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
mRNA
[+]  | hypothetical protein | | rna10 | gene12 | | | | | | | | SGD:S000028734 | | mRNA | | | | | | | | | |
23134 23556 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
exon
[+]  | hypothetical protein | | id13 | rna10 | | | | | | | | SGD:S000028734 | | mRNA | | | | | | | | | |
23134 23556 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
CDS
[+]  | hypothetical protein | | cds10 | rna10 | KZV13404.1 | | | | | KZV13404.1 | | NCBI_GP:KZV13404.1; SGD:S000028734 | | CDS | | | | | | | | | |
23134 23556 R GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence
ECM1 gene
[+]  | | true | gene13 | | WN66_00014 | ECM1 | YAL059W~ECM1~Verified | WN66_00014 | pseudogene | | Pre-ribosomal factor involved in 60S ribosomal protein subunit export; associates with the pre-60S particle; shuttles between the nucleus and cytoplasm | SGD:S000000055 | | Gene | | | | | | | | | |
23147 23785 F GLBRC Y22-3 ( GCA_001634645.1 ) Details | Sequence